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Table of Contents
 
       Executive Summary
Why the National Biospecimen Network?
Management of Ethical and Legal Considerations
Biospecimen and Data Collection and Distribution
Bioinformatics and Data Management
Communications
Governance and Business Models
Demonstration Project

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NBN Blueprint
Executive Summary

Bioinformatics and Data Management

The NBN should support open research access for the scientific community and enable searches of the databases via the Internet. To support the enhanced research capabilities of the NBN, bioinformatics platforms should incorporate computational analysis tools. At the same time, it should protect privacy and confidentiality of biospecimen donors. The NBN informatics strategy should include, whenever possible, existing vocabularies and common data elements. The architecture should have the ability to scale as the volume of data increases, and to adapt as new datasets emerge. To the extent possible, the NBN data architecture would build upon best practices from existing repositories and other genomic-based research resources. Development and implementation will start with a centralized database, and then move to a more decentralized, yet interconnected model as the system matures, capabilities are strengthened, and requirements clarified.

Recommendation 4. While recommendations about the general architecture and common data elements require broad input, to maximize efficiency, a central architect should be designated to build and manage the bioinformatics infrastructure.

It is proposed that this central architect have authority over project personnel, budget, design, and system architecture, and be accountable to the governing principles of the NBN. Critical benchmarks of success for the NBN data system include ease of data entry and retrieval, highly responsive user support, and commitment to NBN Quality Assurance (see also Governance and Business Models).

Recommendation 5. The NBN bioinformatics system should be standards based (e.g., Systemized Nomenclature of Medicine, Health Level Seven, or Minimum Information About a Microarray Experiment for Data; Internet for communications) to enable data and information exchange among system components and the researchers who use them.

In designing the bioinformatics system, a standards-based approach will allow flexibility to employ individualized approaches, while reducing the difficulty involved in developing a comprehensive system that links diverse components of the NBN. The NBN should not impose specific requirements for databases or hardware systems by the operational units.

 

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